Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10761.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:7135106...7142453
NR annotation: CAH3122480.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B3DK16Polycomb group RING finger protein 5-A OS=Danio rerio OX=7955 GN=pcgf5a PE=2 SV=1
Q86SE9Polycomb group RING finger protein 5 OS=Homo sapiens OX=9606 GN=PCGF5 PE=1 SV=1
Q3UK78Polycomb group RING finger protein 5 OS=Mus musculus OX=10090 GN=Pcgf5 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|RAWUL

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF16207RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR032443DomainRAWUL domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR051507FamilyPolycomb group RING fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45893POLYCOMB GROUP RING FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0035102Cellular ComponentPRC1 complexInterproscan
GO:0036353Biological Processobsolete histone H2A-K119 monoubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11489PCGF5; polycomb group RING finger protein 5-Chromosome and associated proteinsko03036deepkoala

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