Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10892.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:8524758...8544062
NR annotation: CAH3162480.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8C5L3CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 SV=2
Q9NZN8CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 SV=1
Q94547Regulator of gene activity OS=Drosophila melanogaster OX=7227 GN=Rga PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04153NOT2_3_5_CNOT2/NOT3/NOT5 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040168FamilyNot2/Not3/Not5Interproscan
IPR038635Homologous_superfamilyCCR4-NOT complex subunit 2/3/5, C-terminal domain superfamilyInterproscan
IPR007282DomainNOT2/NOT3/NOT5, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23326CCR4 NOT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:2000036Biological Processregulation of stem cell population maintenanceInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12605CNOT2, NOT2; CCR4-NOT transcription complex subunit 2-Messenger RNA biogenesisko03019deepkoala

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