Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11345.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:13428602...13434125
NR annotation: XP_027039985.1, tropomodulin-3-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0JNC0	Tropomodulin-1 OS=Bos taurus OX=9913 GN=TMOD1 PE=2 SV=1
P49813	Tropomodulin-1 OS=Mus musculus OX=10090 GN=Tmod1 PE=1 SV=2
P70567	Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03250	Tropomodulin	Tropomodulin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004934	Family	Tropomodulin	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10901	TROPOMODULIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005523	Molecular Function	tropomyosin binding	Interproscan
GO:0005856	Cellular Component	cytoskeleton	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0051694	Biological Process	pointed-end actin filament capping	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10370	TMOD; tropomodulin	-	Cytoskeleton proteins	ko04812	deepkoala