Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11383.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000046:429265...435565
NR annotation: XP_027042495.1, hemicentin-1-like, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P70232Neural cell adhesion molecule L1-like protein OS=Mus musculus OX=10090 GN=Chl1 PE=1 SV=2
O00533Neural cell adhesion molecule L1-like protein OS=Homo sapiens OX=9606 GN=CHL1 PE=1 SV=4
Q9BMN8Tyrosine-protein phosphatase Lar-like OS=Caenorhabditis elegans OX=6239 GN=ptp-3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR051275FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11640NEPHRINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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