Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11622.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000013:2140598...2150093
NR annotation: RMX39607.1, hypothetical protein pdam_00004001 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9Y5T5Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens OX=9606 GN=USP16 PE=1 SV=1
Q4R6X7Ubiquitin carboxyl-terminal hydrolase 16 OS=Macaca fascicularis OX=9541 GN=USP16 PE=2 SV=2
Q08DA3Ubiquitin carboxyl-terminal hydrolase 16 OS=Bos taurus OX=9913 GN=USP16 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11844USP16_45; ubiquitin carboxyl-terminal hydrolase 16/45EC:3.4.19.12
Ubiquitin systemko04121deepkoala

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