Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11734.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000013:3412194...3417862
NR annotation: XP_027040318.1, paraspeckle component 1-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZK88Paraspeckle component 1 OS=Gallus gallus OX=9031 GN=PSPC1 PE=2 SV=1
Q4KLH4Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1
Q8VIJ6Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08075NOPSNOPS (NUC059) domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012975DomainNOPSInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23189RNA RECOGNITION MOTIF-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13219SFPQ, PSF; splicing factor, proline- and glutamine-rich-Spliceosomeko03041deepkoala

TOP