Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11778.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000013:3846616...3850784
NR annotation: XP_027038255.1, reticulon-4-interacting protein 1 homolog, mitochondrial-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q924D0	NAD(P)H oxidoreductase RTN4IP1, mitochondrial OS=Mus musculus OX=10090 GN=Rtn4ip1 PE=1 SV=2
Q0VC50	NAD(P)H oxidoreductase RTN4IP1, mitochondrial OS=Bos taurus OX=9913 GN=RTN4IP1 PE=2 SV=1
Q7T3C7	NAD(P)H oxidoreductase RTN4IP1, mitochondrial OS=Danio rerio OX=7955 GN=rtn4ip1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan
PF13602	ADH_zinc_N_2	Zinc-binding dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013154	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR037397	Family	Reticulon-4-interacting protein 1	Interproscan
IPR050700	Family	YIM1 and Zinc-containing Alcohol Dehydrogenase Families	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11695	ALCOHOL DEHYDROGENASE RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23164	RTN4IP1; reticulon-4-interacting protein 1, mitochondrial	-	Mitochondrial biogenesis	ko03029	deepkoala