Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11907.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000020:313417...324053
NR annotation: XP_027057605.1, protein jagged-1-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P82279	Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE=1 SV=2
B8JI71	Protein eyes shut homolog OS=Danio rerio OX=7955 GN=eys PE=1 SV=2
Q91ZI0	Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus OX=10090 GN=Celsr3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF15711	ILEI	Interleukin-like EMT inducer	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR039477	Domain	ILEI/PANDER domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan