Detailed information of Pocillopora_acuta_HIv2___RNAseq.g11918.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000020:463348...467347
NR annotation: XP_027057565.1, replication factor C subunit 5-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P40937Replication factor C subunit 5 OS=Homo sapiens OX=9606 GN=RFC5 PE=1 SV=1
Q9D0F6Replication factor C subunit 5 OS=Mus musculus OX=10090 GN=Rfc5 PE=1 SV=1
Q9CAQ8Replication factor C subunit 5 OS=Arabidopsis thaliana OX=3702 GN=RFC5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08542Rep_fac_CReplication factor C C-terminal domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR047854DomainReplication factor C, lid domainInterproscan
IPR013748DomainReplication factor C, C-terminalInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan
IPR050238FamilyDNA Replication and Repair Clamp Loader ComplexInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003689Molecular FunctionDNA clamp loader activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005663Cellular ComponentDNA replication factor C complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10756RFC3_5; replication factor C subunit 3/5-DNA repair and recombination proteinsko03400deepkoala

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