Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12042.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000020:3269963...3281550
NR annotation: XP_027052232.1, telomerase-binding protein EST1A-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86US8Telomerase-binding protein EST1A OS=Homo sapiens OX=9606 GN=SMG6 PE=1 SV=2
Q5RAK6Telomerase-binding protein EST1A OS=Pongo abelii OX=9601 GN=SMG6 PE=2 SV=1
P61406Telomerase-binding protein EST1A OS=Mus musculus OX=10090 GN=Smg6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10373EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan
PF13638PIN_4PIN domainDomainInterproscan
PF10374EST1Telomerase activating protein Est1RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018834DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR002716DomainPIN domainInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR045153FamilyEst1/Ebs1-likeInterproscan
IPR019458DomainTelomerase activating protein Est1-like, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15696SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005697Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11124SMG6, EST1A; protein SMG6EC:3.1.-.-
DNA replication proteinsko03032deepkoala

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