Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12067.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000009:308...23190
NR annotation: CAH3116682.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9I9M5Frizzled-1 OS=Xenopus laevis OX=8355 GN=fzd1 PE=1 SV=1
O57329Frizzled-7 OS=Gallus gallus OX=9031 GN=FZD7 PE=2 SV=1
Q9JIP6Frizzled-2 OS=Mus musculus OX=10090 GN=Fzd2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01392FzFz domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036790Homologous_superfamilyFrizzled cysteine-rich domain superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR020067DomainFrizzled domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR050685FamilyLow-density lipoprotein receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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