Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12147.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000009:645378...661610
NR annotation: RMX58737.1, hypothetical protein pdam_00010814 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2GV50DNA-binding protein RFX2 OS=Rattus norvegicus OX=10116 GN=Rfx2 PE=1 SV=1
P48379DNA-binding protein RFX2 OS=Mus musculus OX=10090 GN=Rfx2 PE=1 SV=2
P48377MHC class II regulatory factor RFX1 OS=Mus musculus OX=10090 GN=Rfx1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02257RFX_DNA_bindingRFX DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR003150DomainDNA-binding RFX-type winged-helix domainInterproscan
IPR039779FamilyRFX-like DNA-binding proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12619RFX TRANSCRIPTION FACTOR FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09173RFX1_2_3; regulatory factor X 1/2/3-Transcription factorsko03000deepkoala

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