Genomic Location: Pocillopora_acuta_HIv2___xfSc0000009:1757169...1775121
NR annotation: XP_027051715.1, structural maintenance of chromosomes protein 2-like [Pocillopora damicornis]
| CDS | |||||
| Pocillopora_acuta_HIv2___RNAseq.g12222.t1 | |||||
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g12222.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g12222.t1 |
| Uniprot term | Description |
|---|---|
| Q8CG48 | Structural maintenance of chromosomes protein 2 OS=Mus musculus OX=10090 GN=Smc2 PE=1 SV=2 |
| O95347 | Structural maintenance of chromosomes protein 2 OS=Homo sapiens OX=9606 GN=SMC2 PE=1 SV=2 |
| P50533 | Structural maintenance of chromosomes protein 2 OS=Xenopus laevis OX=8355 GN=smc2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06470 | SMC_hinge | SMC proteins Flexible Hinge Domain | Domain | Interproscan |
| PF02463 | SMC_N | RecF/RecN/SMC N terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR024704 | Family | Structural maintenance of chromosomes protein | Interproscan |
| IPR010935 | Domain | SMCs flexible hinge | Interproscan |
| IPR036277 | Homologous_superfamily | SMCs flexible hinge superfamily | Interproscan |
| IPR027120 | Domain | Smc2, ATP-binding cassette domain | Interproscan |
| IPR003395 | Domain | RecF/RecN/SMC, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43977 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005694 | Cellular Component | chromosome | Interproscan |
| GO:0051276 | Biological Process | chromosome organization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06674 | SMC2; structural maintenance of chromosome 2 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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