Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12405.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000009:4582987...4586036
NR annotation: XP_027035822.1, calmodulin-A-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P04464	Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
Q40302	Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
P02597	Calmodulin, striated muscle OS=Gallus gallus OX=9031 GN=CCM1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR050230	Family	Calcium-Regulated Muscle Contraction and Cellular Process	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23048	MYOSIN LIGHT CHAIN 1, 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016460	Cellular Component	myosin II complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02183	CALM; calmodulin	-	Exosome	ko04147	deepkoala