Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12478.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000246:15172...25903
NR annotation: CAH3155136.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q80TR8	DDB1- and CUL4-associated factor 1 OS=Mus musculus OX=10090 GN=Dcaf1 PE=1 SV=4
Q9Y4B6	DDB1- and CUL4-associated factor 1 OS=Homo sapiens OX=9606 GN=DCAF1 PE=1 SV=3
Q9W2F2	Protein mahjong OS=Drosophila melanogaster OX=7227 GN=mahj PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08513	LisH	LisH	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594	Conserved_site	LIS1 homology motif	Interproscan
IPR033270	Family	VPRBP/DCAF1 family	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13129	VPRBP PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0080008	Cellular Component	Cul4-RING E3 ubiquitin ligase complex	Interproscan