Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12537.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:324230...324976
NR annotation: XP_027054637.1, T-cell leukemia homeobox protein 1-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P15858	Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE=4 SV=1
P19601	Homeobox protein SAX-1 (Fragment) OS=Gallus gallus OX=9031 GN=SAX1 PE=2 SV=2
P42580	NK1 transcription factor-related protein 2 OS=Mus musculus OX=10090 GN=Nkx1-2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan