Detailed information of Pocillopora_acuta_HIv2___RNAseq.g1273.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000012:2394741...2412598
NR annotation: CAH3130484.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35447Spondin-1 OS=Xenopus laevis OX=8355 GN=spon1 PE=2 SV=1
D3ZTD8Semaphorin-5A OS=Rattus norvegicus OX=10116 GN=Sema5a PE=1 SV=1
Q9P2N4A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens OX=9606 GN=ADAMTS9 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050969FamilyDevelopmental Signaling ModulatorsInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR004850DomainNtA (N-terminal agrin) domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14949EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0043113Biological Processreceptor clusteringInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan

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