Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g12938.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:5018918...5024941
NR annotation: CAH3038661.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O95149	Snurportin-1 OS=Homo sapiens OX=9606 GN=SNUPN PE=1 SV=1
Q80W37	Snurportin-1 OS=Mus musculus OX=10090 GN=Snupn PE=2 SV=1
Q68FP5	Snurportin-1 OS=Rattus norvegicus OX=10116 GN=Snupn PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11538	Snurportin1	Snurportin1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047857	Domain	Snurportin-1, m3G cap-binding domain	Interproscan
IPR017336	Family	Snurportin-1	Interproscan
IPR024721	Domain	Snurportin-1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13403	SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0061015	Biological Process	snRNA import into nucleus	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13151	SNUPN, RNUT1; snurportin-1	-	Spliceosome	ko03041	deepkoala