Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13087.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:6996288...7006216
NR annotation: CAH3038378.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70422General transcription factor IIH subunit 4 OS=Mus musculus OX=10090 GN=Gtf2h4 PE=1 SV=1
Q92759General transcription factor IIH subunit 4 OS=Homo sapiens OX=9606 GN=GTF2H4 PE=1 SV=1
P60027General transcription factor IIH subunit 4 OS=Pan troglodytes OX=9598 GN=GTF2H4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03849Tfb2Transcription factor Tfb2FamilyInterproscan
PF18307Tfb2_CTranscription factor Tfb2 (p52) C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004598FamilyTranscription factor TFIIH subunit p52/Tfb2Interproscan
IPR040662DomainTranscription factor Tfb2, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13152TFIIH, POLYPEPTIDE 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0001671Molecular FunctionATPase activator activityInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03144TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4-DNA repair and recombination proteinsko03400deepkoala

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