Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13136.t3 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:7415333...7440394
NR annotation: XP_027056631.1, zinc finger CCCH domain-containing protein 13-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q02410Amyloid-beta A4 precursor protein-binding family A member 1 OS=Homo sapiens OX=9606 GN=APBA1 PE=1 SV=3
Q99767Amyloid-beta A4 precursor protein-binding family A member 2 OS=Homo sapiens OX=9606 GN=APBA2 PE=1 SV=3
B2RUJ5Amyloid-beta A4 precursor protein-binding family A member 1 OS=Mus musculus OX=10090 GN=Apba1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00640PIDPhosphotyrosine interaction domain (PTB/PID)DomainInterproscan
PF00595PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006020DomainPTB/PI domainInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051230FamilyAmyloid-beta A4 Precursor Protein-BindingInterproscan
IPR001478DomainPDZ domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12345SYNTENIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0043197Cellular Componentdendritic spineInterproscan

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