Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:7873544...7889782
NR annotation: XP_027056589.1, uncharacterized protein LOC113683539 [Pocillopora damicornis]
| CDS |
| Pocillopora_acuta_HIv2___RNAseq.g13174.t1 |
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g13174.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g13174.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12872 | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| PF00567 | TUDOR | Tudor domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025605 | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR002999 | Domain | Tudor domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR035437 | Homologous_superfamily | SNase-like, OB-fold superfamily | Interproscan |
| IPR050374 | Family | RRT5/SRSF/Splicing Factor SR | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR041966 | Homologous_superfamily | LOTUS-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23003 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
