Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13301.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:9278954...9280852
NR annotation: RMX47549.1, hypothetical protein pdam_00019077, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B5XF11Lysine-specific demethylase 8 OS=Salmo salar OX=8030 GN=kdm8 PE=2 SV=1
B2GUS6Lysine-specific demethylase 8 OS=Xenopus tropicalis OX=8364 GN=kdm8 PE=2 SV=1
A8E534Lysine-specific demethylase 8 OS=Danio rerio OX=7955 GN=kdm8 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13621Cupin_8Cupin-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR041667DomainCupin-like domain 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12461HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0051864Molecular Functionhistone H3K36 demethylase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10277KDM8, JMJD5; [protein]-arginine 3-hydroxylase / proteaseEC:1.14.11.73
EC:3.4.-.-
Ribosome biogenesisko03009deepkoala

TOP