Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g1333.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000012:3056739...3065439
NR annotation: CAH3130558.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q99LE6	ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1
Q9UG63	ATP-binding cassette sub-family F member 2 OS=Homo sapiens OX=9606 GN=ABCF2 PE=1 SV=2
Q2KJA2	ATP-binding cassette sub-family F member 2 OS=Bos taurus OX=9913 GN=ABCF2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF12848	ABC_tran_Xtn	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050611	Family	ATP-binding cassette sub-family F member, EF3 subfamily	Interproscan
IPR032781	Domain	ABC-transporter extension domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06185	ABCF2; ATP-binding cassette, subfamily F, member 2	-	Ribosome biogenesis	ko03009	deepkoala