Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13490.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000032:967320...987113
NR annotation: XP_027038136.1, probable tubulin polyglutamylase TTLL1 isoform X1 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q0VC71	Polyglutamylase complex subunit TTLL1 OS=Bos taurus OX=9913 GN=TTLL1 PE=2 SV=1
Q91V51	Polyglutamylase complex subunit TTLL1 OS=Mus musculus OX=10090 GN=Ttll1 PE=1 SV=1
Q5PPI9	Polyglutamylase complex subunit TTLL1 OS=Rattus norvegicus OX=10116 GN=Ttll1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR004344	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12241	TUBULIN POLYGLUTAMYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0015631	Molecular Function	tubulin binding	Interproscan
GO:0018095	Biological Process	protein polyglutamylation	Interproscan
GO:0070740	Molecular Function	tubulin-glutamic acid ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0036211	Biological Process	protein modification process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16599	TTLL1; tubulin polyglutamylase TTLL1	EC:6.3.2.61	Cytoskeleton proteins	ko04812	deepkoala