Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13576.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:310547...312685
NR annotation: XP_027038779.1, brevican core protein-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A3FM55	C-type lectin 1 OS=Hydrophis hardwickii OX=8781 PE=2 SV=1
Q9DEA1	Snaclec agkicetin-C subunit beta OS=Deinagkistrodon acutus OX=36307 PE=1 SV=1
Q9YI92	Snaclec mamushigin subunit beta OS=Gloydius blomhoffii OX=242054 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00024	PAN_1	PAN domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan