Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13724.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:1451575...1457736
NR annotation: XP_027045011.1, probable serine/threonine-protein kinase DDB_G0271682 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9LHG8	Protein ELC OS=Arabidopsis thaliana OX=3702 GN=ELC PE=1 SV=1
Q9FFY6	Protein ELC-like OS=Arabidopsis thaliana OX=3702 GN=ELCL PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|UBC-like\|UEV
Ubiquitin Family	E2\|UEV\|UEV

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05743	UEV	UEV domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008883	Domain	Ubiquitin E2 variant, N-terminal	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR052070	Family	ESCRT-I complex UEV domain-containing protein	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23306	TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015031	Biological Process	protein transport	Interproscan
GO:0036211	Biological Process	protein modification process	Interproscan
GO:0000813	Cellular Component	ESCRT I complex	Interproscan
GO:0008333	Biological Process	endosome to lysosome transport	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12183	TSG101, STP22, VPS23; ESCRT-I complex subunit TSG101	-	Exosome	ko04147	deepkoala