Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13771.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:1889354...1892639
NR annotation: XP_027036660.1, SRA stem-loop-interacting RNA-binding protein, mitochondrial-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2HJG2Poly(U)-binding-splicing factor PUF60 OS=Bos taurus OX=9913 GN=PUF60 PE=2 SV=1
Q5R469Poly(U)-binding-splicing factor PUF60 OS=Pongo abelii OX=9601 GN=PUF60 PE=2 SV=1
Q9UHX1Poly(U)-binding-splicing factor PUF60 OS=Homo sapiens OX=9606 GN=PUF60 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25095SLIRP; SRA stem-loop-interacting RNA-binding protein, mitochondrial-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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