Detailed information of Pocillopora_acuta_HIv2___RNAseq.g13823.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:2364120...2382635
NR annotation: RMX36694.1, hypothetical protein pdam_00015837, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF00188CAPCysteine-rich secretory protein familyDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001283FamilyCysteine-rich secretory protein-relatedInterproscan
IPR003886DomainNIDO domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR035940Homologous_superfamilyCAP superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR005533DomainAMOP domainInterproscan
IPR034113DomainGolgi-associated plant pathogenesis-related protein 1, SCP domainInterproscan
IPR014044DomainCAP domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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