Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14154.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:6180969...6187426
NR annotation: XP_027050070.1, protein YIF1B-like isoform X1 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5U3G6	Protein YIF1B OS=Danio rerio OX=7955 GN=yif1b PE=2 SV=2
Q4FZQ0	Protein YIF1B-B OS=Xenopus laevis OX=8355 GN=yif1b-b PE=2 SV=1
Q9CX30	Protein YIF1B OS=Mus musculus OX=10090 GN=Yif1b PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03878	YIF1	YIF1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005578	Family	Yif1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14083	YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006888	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0005793	Cellular Component	endoplasmic reticulum-Golgi intermediate compartment	Interproscan
GO:0030134	Cellular Component	COPII-coated ER to Golgi transport vesicle	Interproscan
GO:0030173	Cellular Component	obsolete integral component of Golgi membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20362	YIF1; protein transport protein YIF1	-	Membrane trafficking	ko04131	deepkoala