Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14182.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:6589377...6604954
NR annotation: XP_027048784.1, polycystic kidney disease protein 1-like 2 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2A259Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1
Q9P0L9Polycystin-2-like protein 1 OS=Homo sapiens OX=9606 GN=PKD2L1 PE=1 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR051223FamilyPolycystinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP