Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14206.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:6857709...6861709
NR annotation: XP_027043017.1, replication stress response regulator SDE2-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6IQ49Splicing regulator SDE2 OS=Homo sapiens OX=9606 GN=SDE2 PE=1 SV=1
Q5RET9Splicing regulator SDE2 OS=Pongo abelii OX=9601 GN=SDE2 PE=2 SV=1
Q7T293Splicing regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13019Sde2_N_UbiSilencing defective 2 N-terminal ubiquitin domainDomainInterproscan
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024974DomainSde2, N-terminal ubiquitin domainInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR025086DomainSDE2-like, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25059SDE2; replication stress response regulator SDE2-DNA repair and recombination proteinsko03400deepkoala

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