Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14246.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:7286335...7287381
NR annotation: XP_027036612.1, substance-P receptor-like [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005422 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00001
all species →		7tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276
all species →		FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452
all species →		DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR050125
all species →		FamilyG-protein coupled receptor opsinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240
all species →		OPSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →		Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →		Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0007602
all species →		Biological ProcessphototransductionInterproscan
GO:0008020
all species →		Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482
all species →		Biological Processcellular response to light stimulusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Pocillopora_acuta_HIv2___RNAseq.g14246.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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