Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14563.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000391:1862953...1868364
NR annotation: XP_027050688.1, tyrosyl-DNA phosphodiesterase 2-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O95551	Tyrosyl-DNA phosphodiesterase 2 OS=Homo sapiens OX=9606 GN=TDP2 PE=1 SV=1
Q28FQ5	Tyrosyl-DNA phosphodiesterase 2 OS=Xenopus tropicalis OX=8364 GN=tdp2 PE=2 SV=2
A7YWI9	Tyrosyl-DNA phosphodiesterase 2 OS=Bos taurus OX=9913 GN=TDP2 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|UBA

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14555	UBA_4	UBA-like domain	Domain	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR051547	Family	Tyrosyl-DNA phosphodiesterase 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15822	TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0016605	Cellular Component	PML body	Interproscan
GO:0070260	Molecular Function	5'-tyrosyl-DNA phosphodiesterase activity	Interproscan