Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14868.t1b in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000020:2761908...2765685
NR annotation: XP_027044728.1, uncharacterized protein LOC113672619 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___RNAseq.g14868.t1b

TTGTCTTTTCCAGGTTCTGATTACTCTGAGGAAACAGAAGGAGGACAAAAAGAAGATGGCAAGGAAGAGGAATACATACCTTCTCAGCATCCCACAGACGTCCGTAGAGAGATGTCTTTGCTACCACGTCCTATTCGACATTTCGTCAACCGAAAGAGAGAGCTCAGCGAGATAAAACGGTTTCTTAATAAGAACGACTCACAGAACGACTGTAGATGCATCCTGTTACATGGGTCTGTCGGTATGGGGAAAACTTCAACTGCAGTCAAGGCGGTAAACGAGATATTAGATGCCGATTCCGAGACCGTGGTTGCCTACGTAAACTGCAGGTTTTTGGCCTCCCTTGATGATCTCGCTGGGAAGATTGCCAAGCAGCTGTACCACTTCCCTTTCAGAGAGCCGGCAATTGGTAGAATCAAAAGTCTCCTTATTGAAGAAGAGAATTTCCATCCTCTACTGCTGCTCGACAACTTTGAATTCTTAGTTCAGTTGGACGATGGAAGAAGCATGGAGATGCAGGCTGAAAGAAGATTTCCATCCGAAAAGACAGAGATCATGAAGTTCTTCAGAGACATCGCTACAAAGTCAAAAAAAGCGCATCTGCTGGTGACCTCATCGAAGAATATCGATATCCTTCAGACTGGTCAGCAGTGGATCAAGTTGCTTCCCTTCAATGAAGATGATTCTTTACAACTGTTGAAGAAGGTCTATGGTGACACCCCTCTGGAAAAAGAAACTGCCTGCAAAATAGCACATTGTTGTGGAGGTATTCCATTCGTCCTGTTTGCCTTGGCAGCGTGGCAGGATAACCCAACAGATCTTCTGGAAATGCTGACGAACCCGGACCGCAAAGAAAAGTTTACAAGAATTTCAGATGCAACTGAAGATGAGAAGATCGACGTTTGTATCGACGTTTGCTTCAAGAGACTAGATACACACCATCAGAATACCCTTGTGTCTCTAACAGTATTCAGAGGTCTCTTTACCACCTCAAGAGCTTCAAGAATCCTGAAGTCTGCTGAGTTAAGAGGTGCGATAGATGAGCTAGCAAGGAGGTCGTTTCTGGAGCAGCATATTTCCGACCCATATCATTACAGTATCCTCACAGTATACAGCCTCTACTGCCAGAACAAGACCATAGAAACACCTTTCCAGGAAGTGTTTTCCGACGCCCGTAAGATGTTCATCAATTACGTTCTTGGTTTCCTTGAAGAAACCTTCCAGAGCTTCCTTAGCACTGATGTCTCAAAGGCTATCGTCGAATACCGACGTGAAGATGAAATCATTATGCAGCTCATCGATTGGTTTGGTGTAAAAGGTTCAATGGAGGAAGATCAAGAGAAAAGGTGCACCGATGTCTTCAACAAGGTGGGAGAACTGCTTGGCAAAATGATGGGAAAGAAAACATTTGACGGCGCCTTTACACAACTGAAAGATAAGTGTAAGGAAAGTAAAGATCCCAAGAGATTGGGAGAATGTCTCACGTCCCTGGGAATCAAGGAAGTGTTCAGTTGCTGCTGCTCTCCAGACCTGTGTGATGAAGCTTCTGGACGAGCCAAGCCCTATCTGCTGGAGGCCGATAGAATCCAATGTGATCTTGATATCAGCACTGGTAACAGTCGAGCTCAATGTCTTGCCAAACTTGGTCGGTGTCTCGTAAAGGAACAAAGCTTCACTGAAGGGAAAGAAAAGATTCGACAGGCGATCGACATTCGAAAGGCACGTGGGGAAGCAGACATTGTTATGTTAGGTGCAACATACAATGACCTAGCAGTGGCTCTCTCCCTTGAGGGAAACCATGAAGAGGCCATAAAAGTTAGAGAAGGAGAGACGTTAGAAATATACAGAAAACACTTGGGAGACCGGCATCCCTTTACGGCAACCATCCTGAACAATCTGTCCAACAACTACTCTGCCCTAGGTGAGTACGACATCGCCAAACAATATTCAGAGGAAGCGCTGAAGATTCGGCGTGAGCTGCTGAAAGACCATTACGACACGGCTAAGTCCTTGTTTGATCTCGGGATGGTTCACAAAAATAGGGAAGAATTCAAGGATGCCAAAGCTTACCTGAGAGAATGTGAAAGCATGCAAAGGTTTCTGGATGACCCTACCATGATCAGCGAGCTTGAAAGAACCATAAAAGAGGTGGAGGAATGCATGCTCAACGAAGGAAAAGAAAAACTCACGAAATCAGATGATGCTCTTGGGCAAGAAGGAAAGTCGATCATCTTACAATAA

Transcript

Pocillopora_acuta_HIv2___RNAseq.g14868.t1b

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13401	AAA_22	AAA domain	Domain	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR049945	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan