Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g14923.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000020:3337535...3343024
NR annotation: RMX45359.1, hypothetical protein pdam_00000818 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q6IRP0	E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 SV=1
Q0II22	E3 ubiquitin-protein ligase RNF126 OS=Bos taurus OX=9913 GN=RNF126 PE=2 SV=1
Q9BV68	E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens OX=9606 GN=RNF126 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14369	zinc_ribbon_9	zinc-ribbon	Domain	Interproscan
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR039525	Domain	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11982	RNF115_126; E3 ubiquitin-protein ligase RNF115/126	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala