Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g1495.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000387:648054...655358
NR annotation: XP_027055091.1, WD repeat domain phosphoinositide-interacting protein 3-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q5ZL16	WD repeat domain phosphoinositide-interacting protein 3 OS=Gallus gallus OX=9031 GN=WDR45B PE=2 SV=1
Q640T2	WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus tropicalis OX=8364 GN=wdr45b PE=2 SV=1
Q68F45	WD repeat domain phosphoinositide-interacting protein 3 OS=Xenopus laevis OX=8355 GN=wdr45b PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21032	PROPPIN	PROPPIN	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR048720	Family	PROPPIN	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11227	WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000422	Biological Process	autophagy of mitochondrion	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006497	Biological Process	protein lipidation	Interproscan
GO:0019898	Cellular Component	extrinsic component of membrane	Interproscan
GO:0032266	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0034045	Cellular Component	phagophore assembly site membrane	Interproscan
GO:0034497	Biological Process	protein localization to phagophore assembly site	Interproscan
GO:0044804	Biological Process	nucleophagy	Interproscan
GO:0080025	Molecular Function	phosphatidylinositol-3,5-bisphosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22991	WDR45, WIPI4, WIPI3; WD repeat-containing protein 45	-	Membrane trafficking	ko04131	deepkoala