Genomic Location: Pocillopora_acuta_HIv2___xfSc0000034:973117...982849
NR annotation: XP_027051110.1, uncharacterized protein LOC113678422 isoform X1 [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families
| CDS |
| Pocillopora_acuta_HIv2___RNAseq.g15038.t1 |
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g15038.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g15038.t1 |
| UniProt accession | Description |
|---|---|
| A8EZG1 | DNA mismatch repair protein MutS OS=Rickettsia canadensis (strain McKiel) OX=293613 GN=mutS PE=3 SV=1 |
| A8F164 | DNA mismatch repair protein MutS OS=Rickettsia massiliae (strain Mtu5) OX=416276 GN=mutS PE=3 SV=1 |
| Q2RNG0 | DNA mismatch repair protein MutS OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=mutS PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005817 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01624 all species → | MutS_I | MutS domain I | Domain | Interproscan |
| PF00488 all species → | MutS_V | MutS domain V | Domain | Interproscan |
| PF05192 all species → | MutS_III | MutS domain III | Domain | Interproscan |
| PF05190 all species → | MutS_IV | MutS family domain IV | Domain | Interproscan |
| PF05188 all species → | MutS_II | MutS domain II | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000432 all species → | Domain | DNA mismatch repair protein MutS, C-terminal | Interproscan |
| IPR007695 all species → | Domain | DNA mismatch repair protein MutS-like, N-terminal | Interproscan |
| IPR017261 all species → | Family | DNA mismatch repair protein MutS/MSH | Interproscan |
| IPR045076 all species → | Family | DNA mismatch repair MutS family | Interproscan |
| IPR007696 all species → | Domain | DNA mismatch repair protein MutS, core | Interproscan |
| IPR036678 all species → | Homologous_superfamily | MutS, connector domain superfamily | Interproscan |
| IPR016151 all species → | Homologous_superfamily | DNA mismatch repair protein MutS, N-terminal | Interproscan |
| IPR007861 all species → | Domain | DNA mismatch repair protein MutS, clamp | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR007860 all species → | Domain | DNA mismatch repair protein MutS, connector domain | Interproscan |
| IPR036187 all species → | Homologous_superfamily | DNA mismatch repair protein MutS, core domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11361 all species → | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006298 all species → | Biological Process | mismatch repair | Interproscan |
| GO:0030983 all species → | Molecular Function | mismatched DNA binding | Interproscan |
| GO:0003690 all species → | Molecular Function | double-stranded DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0043504 all species → | Biological Process | mitochondrial DNA repair | Interproscan |
| GO:0140664 all species → | Molecular Function | ATP-dependent DNA damage sensor activity | Interproscan |
Pocillopora_acuta_HIv2___RNAseq.g15038.t1.
