Detailed information of Pocillopora_acuta_HIv2___RNAseq.g15325.t1a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000006:2762192...2777485
NR annotation: XP_027037318.1, U4/U6.U5 tri-snRNP-associated protein 1-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XIW8U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Sart1 PE=1 SV=1
Q9Z315U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1
O43290U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens OX=9606 GN=SART1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19252HINDHIND motifMotifInterproscan
PF03343SART-1SART-1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005011FamilySNU66/SART1 familyInterproscan
IPR045347Conserved_siteHIND motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14152SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000481Biological Processmaturation of 5S rRNAInterproscan
GO:0045292Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11984SART1, HAF, SNU66; U4/U6.U5 tri-snRNP-associated protein 1-Ubiquitin systemko04121deepkoala

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