Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g15795.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:275132...285817
NR annotation: CAH3108787.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5XIP1	Protein pelota homolog OS=Rattus norvegicus OX=10116 GN=Pelo PE=1 SV=1
Q9BRX2	Protein pelota homolog OS=Homo sapiens OX=9606 GN=PELO PE=1 SV=2
Q80X73	Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03465	eRF1_3	eRF1 domain 3	Domain	Interproscan
PF03463	eRF1_1	eRF1 domain 1	Domain	Interproscan
PF03464	eRF1_2	eRF1 domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005142	Domain	eRF1 domain 3	Interproscan
IPR029064	Homologous_superfamily	Ribosomal protein eL30-like superfamily	Interproscan
IPR005140	Domain	eRF1 domain 1/Pelota-like	Interproscan
IPR038069	Homologous_superfamily	Pelota/DOM34, N-terminal domain	Interproscan
IPR005141	Domain	eRF1 domain 2	Interproscan
IPR042226	Homologous_superfamily	eRF1, domain 2 superfamily	Interproscan
IPR004405	Family	Translation release factor pelota	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10853	PELOTA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0070481	Biological Process	nuclear-transcribed mRNA catabolic process, non-stop decay	Interproscan
GO:0070966	Biological Process	nuclear-transcribed mRNA catabolic process, no-go decay	Interproscan
GO:0071025	Biological Process	RNA surveillance	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0032790	Biological Process	ribosome disassembly	Interproscan
GO:0070651	Biological Process	nonfunctional rRNA decay	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06965	PELO, DOM34, pelA; protein pelota	-	Messenger RNA biogenesis	ko03019	deepkoala