Detailed information of Pocillopora_acuta_HIv2___RNAseq.g16011.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:2693019...2701058
NR annotation: XP_027060224.1, replication factor C subunit 2-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q05B83Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 PE=2 SV=1
P35250Replication factor C subunit 2 OS=Homo sapiens OX=9606 GN=RFC2 PE=1 SV=3
Q641W4Replication factor C subunit 2 OS=Rattus norvegicus OX=10116 GN=Rfc2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08542Rep_fac_CReplication factor C C-terminal domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan
IPR013748DomainReplication factor C, C-terminalInterproscan
IPR050238FamilyDNA Replication and Repair Clamp Loader ComplexInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR047854DomainReplication factor C, lid domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003689Molecular FunctionDNA clamp loader activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005663Cellular ComponentDNA replication factor C complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10755RFC2_4; replication factor C subunit 2/4-DNA repair and recombination proteinsko03400deepkoala

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