Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g16097.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:3508180...3514549
NR annotation: XP_027053914.1, N-lysine methyltransferase setd6-like isoform X1 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___RNAseq.g16097.t1

ATGGCAAGTGAGAATACAGAAGAAACGGACCAAATATTGGCTGAATTTTTGTCCTGGTGTGAGCGAAACGACCTCAAATTAAGTGAAAAGGTGAAGGTTGGACTGAAGGGATCCTGTCATCGTTATGGCATGACAGCTGTGGAGAACATTGAGGAAGGGGAATCCTTGTTTCAAATTCCACGGTCACTTGTTTTGCAACCGAAGACTTCATCCATCTCCAAACTTTTTGAAGATTTATCTGATGAGGATGAGTTTGAATCAGAAAGAGGGTCTGGCTGGGCTCCTCTTCTCCTGACATTGATGTACGAGTACACTAATCCAACATCTCACTGGAAGCCGTATTTAAACCTGGTGCCTGAAGTAACAGTCTTGGACCAACCCATGTTTTGGAACGTAGAGGAGAGACAAAGAGAACTGAAAGGGACTGGGATTGAGGAAGATGTTGAAAATGATGTACAGGGCATCGAGGAGGAATATAATACTACAGCTTTGCCTTTTATTAAGAAGTATCCACAGTATTTCAGTGAGTCCTGTCACAGTCTTTCTCTGTACAAACACATGGCAGCATTTGTCATGGCCTACAGTTTCACTGAACATAAGTCAAGTCCTGATGATGATGATGATGATGATAGTGAAGATGATGATGATGAAGATGAGGATGATGATGCAGCTCCTGCCATGGTGCCAATGGCAGACATACTTAATCATATCAGTAACAATAATGCTCACTTGGAGTTTGGTGCTCAAACTCTGACAATGGTGGCAACGCAAGATATTCCTAAGGGACAGGAAATTTTCAATACTTATGGTAACCTTGCCAACTGTCACCTTCTGCAGTCATATGGATTTGTGGAGGAAGAATTACCAAATCCATATGACATGGTAGAATTACCCATCAGTGCATTTACTGAGGTAATGAAGGACAATCAGTCACAACAGGAGAAAGGAATATTTCACTCTAAGCTTGAGTTCCTAGAAGAAGCAGGTGTGGCTTCCAAGGATGACTTGTTTCTTTTTGGACGTGAGGGATGTTCACACTTTGGTCCAGATTTGTATGCTACTCTGAGAATCCTTCATTTGTCTGGAGAGAAGTTCAAACAATTATTGGAAGAGCAAGTAAAGAAACAGAGAAGTGAAGAATTTGATGACATTGGACATGTGCTGGATCAAATTGATGATGAAACTAAAAAGGATACATGTTGGAGATTCTTGGAGCTTGTTTATAAGGCTGAATGTGACAAAGGGAAGAAGAAAAGGAAAATCAAGGAAAAGGACTTGCAACTGACACAGAAGAAAATTAAAACTACTGGCTATGGAAATTCAGACTCCATGGAGAGTCTACTGATCAGCACTAAAGATTGCGGTAACAGACACATACAAACTAACGATGGCAGTTTAGAAAAAAACAAAATTGAAAGTGGAAATGAATTAAATCCCTGGTCCAAAGATGACGCTTGTGCTTGTGTGAAGAGAACTTCAGACCCAGGAAAATGTGATGCTGAGAGAGATGAAGCTTCAGATGTAAGAAGCACAGGGAAAAAGAAGCTGTGCTGTGATGAGGATGGCAAAGCTGGTGGCAGCAGTGATATCAGTGGGGATCACATAAGTAATGAAAATGAAACCAACAGCAGAAATGACAATTATGATGATGATGATGATGACAATGATGGCAATGTCGATGACAACAGCAAGGATGATGATAGTGGGGATGATAGCCAAGAAGGATCTAAACTATCTCTGAGTTATGAGATGATATCTCAGTGGCCATTGGAATGGAGGAGAACCCTTAAAAGTGTTGCGGACTTTTGTGTAAAACAAAGATACGGAGACAGCATTATGAATGAAGAAAATACAGTCGAGAACTGCAGCAGAAGACATCTGTCTGTACTAAGAATCAAGCAAGGACAGAAATCTATTTTCGGGCGCATTTGTGAACTAGCCACTGACGTTAATGCATAG

Transcript

Pocillopora_acuta_HIv2___RNAseq.g16097.t1

Protein

Uniprot

Uniprot term	Description
C0H8I2	N-lysine methyltransferase setd6 OS=Salmo salar OX=8030 GN=setd6 PE=2 SV=1
Q803K4	N-lysine methyltransferase setd6 OS=Danio rerio OX=7955 GN=setd6 PE=2 SV=1
Q6INM2	N-lysine methyltransferase setd6 OS=Xenopus laevis OX=8355 GN=setd6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00856	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001214	Domain	SET domain	Interproscan
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan
IPR036464	Homologous_superfamily	Rubisco LSMT, substrate-binding domain superfamily	Interproscan
IPR044430	Domain	SETD6, SET domain	Interproscan
IPR050600	Family	SETD3/SETD6 methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13271	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016279	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0018022	Biological Process	peptidyl-lysine methylation	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0018026	Biological Process	peptidyl-lysine monomethylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05302	SETD6; N-lysine methyltransferase SETD6	EC:2.1.1.-	Chromosome and associated proteins	ko03036	deepkoala