Detailed information of Pocillopora_acuta_HIv2___RNAseq.g16224.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:4588701...4603718
NR annotation: CAH3151366.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2BGR3DNA excision repair protein ERCC-6-like OS=Danio rerio OX=7955 GN=ercc6l PE=1 SV=1
A6QQR4DNA excision repair protein ERCC-6-like OS=Bos taurus OX=9913 GN=ERCC6L PE=2 SV=1
Q8BHK9DNA excision repair protein ERCC-6-like OS=Mus musculus OX=10090 GN=Ercc6l PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR050496FamilySNF2/RAD54 Helicase and DNA RepairInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45629SNF2/RAD54 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0015616Molecular FunctionDNA translocase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20093ERCC6L, PICH; DNA excision repair protein ERCC-6-likeEC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

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