Detailed information of Pocillopora_acuta_HIv2___RNAseq.g16294.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:5133520...5144533
NR annotation: XP_027036647.1, rab GTPase-binding effector protein 1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35550Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1
O35551Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=2
Q15276Rab GTPase-binding effector protein 1 OS=Homo sapiens OX=9606 GN=RABEP1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF03528RabaptinRabaptinCoiled-coilInterproscan
PF09311Rab5-bindRabaptin-like proteinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000306DomainFYVE zinc fingerInterproscan
IPR003914FamilyRabaptinInterproscan
IPR018514DomainRabaptin coiled-coil domainInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR015390DomainRabaptin, GTPase-Rab5 binding domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31179RAB GTPASE-BINDING EFFECTOR PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12480RABEP1; Rab GTPase-binding effector protein 1-Membrane traffickingko04131deepkoala

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