Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g1659.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000387:2630073...2632229
NR annotation: XP_027042289.1, uncharacterized protein LOC113670353 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q2S1V4	Tryptophanase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=tnaA PE=3 SV=1
Q0C406	Tryptophanase OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=tnaA PE=3 SV=1
Q894M8	Tryptophanase OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=tnaA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01212	Beta_elim_lyase	Beta-eliminating lyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR011166	Family	Beta-eliminating lyase family	Interproscan
IPR001597	Domain	Aromatic amino acid beta-eliminating lyase/threonine aldolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32325	BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009072	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016830	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0016829	Molecular Function	lyase activity	Interproscan