Detailed information of Pocillopora_acuta_HIv2___RNAseq.g16708.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000010:544169...559865
NR annotation: CAH3109895.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JHJ2ATP-dependent RNA helicase DDX55 OS=Danio rerio OX=7955 GN=ddx55 PE=2 SV=2
Q6ZPL9ATP-dependent RNA helicase DDX55 OS=Mus musculus OX=10090 GN=Ddx55 PE=1 SV=2
Q8NHQ9ATP-dependent RNA helicase DDX55 OS=Homo sapiens OX=9606 GN=DDX55 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13959DUF4217Domain of unknown function (DUF4217)DomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025313DomainDomain of unknown function DUF4217Interproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24031RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14809DDX55, SPB4; ATP-dependent RNA helicase DDX55/SPB4EC:5.6.2.7
Ribosome biogenesisko03009deepkoala

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