Detailed information of Pocillopora_acuta_HIv2___RNAseq.g16749.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000010:1205139...1208262
NR annotation: XP_027043971.1, rhodopsin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1JPS6Melanopsin-like OS=Danio rerio OX=7955 GN=opn4l PE=2 SV=1
Q6XL69Melanopsin OS=Rutilus rutilus OX=48668 GN=opn4 PE=2 SV=1
Q9UHM6Melanopsin OS=Homo sapiens OX=9606 GN=OPN4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan

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