Genomic Location: Pocillopora_acuta_HIv2___Sc0000007:480239...481654
NR annotation: PFX26491.1, Gag-Pol polyprotein [Stylophora pistillata]
| CDS |
| Pocillopora_acuta_HIv2___RNAseq.g17433.t1 |
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g17433.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g17433.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18701 | DUF5641 | Family of unknown function (DUF5641) | Domain | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR040676 | Domain | Domain of unknown function DUF5641 | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22955 | RETROTRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
