Detailed information of Pocillopora_acuta_HIv2___RNAseq.g18079.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000023:762917...770166
NR annotation: XP_027060296.1, minor histocompatibility antigen H13-like isoform X1 [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D8V0Signal peptide peptidase OS=Mus musculus OX=10090 GN=Hm13 PE=1 SV=1
Q8TCT9Signal peptide peptidase OS=Homo sapiens OX=9606 GN=HM13 PE=1 SV=1
B9FJ61Signal peptide peptidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SPP2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005254 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04258
all species →		Peptidase_A22BSignal peptide peptidaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007369
all species →		FamilyPeptidase A22B, signal peptide peptidaseInterproscan
IPR006639
all species →		FamilyPresenilin/signal peptide peptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12174
all species →		SIGNAL PEPTIDE PEPTIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0042500
all species →		Molecular Functionaspartic endopeptidase activity, intramembrane cleavingInterproscan
GO:0006465
all species →		Biological Processsignal peptide processingInterproscan
GO:0033619
all species →		Biological Processmembrane protein proteolysisInterproscan
GO:0071458
all species →		Cellular Componentobsolete integral component of cytoplasmic side of endoplasmic reticulum membraneInterproscan
GO:0071556
all species →		Cellular Componentobsolete integral component of lumenal side of endoplasmic reticulum membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09595HM13; minor histocompatibility antigen H13EC:3.4.23.-
Peptidases and inhibitorsko01002deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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