Detailed information of Pocillopora_acuta_HIv2___RNAseq.g18133.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000023:1367848...1379714
NR annotation: CAH3163120.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3ZHV2Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1
Q69ZZ9Microtubule-actin cross-linking factor 1, isoforms 6/7 OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=3
O94854Microtubule-actin cross-linking factor 1, isoforms 6/7 OS=Homo sapiens OX=9606 GN=MACF1 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435SpectrinSpectrin repeatDomainInterproscan
PF02187GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR036534Homologous_superfamilyGAR domain superfamilyInterproscan
IPR003108DomainGAR domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR043197FamilyPlakinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23169ENVOPLAKINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0045104Biological Processintermediate filament cytoskeleton organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10382DST; dystonin-Cytoskeleton proteinsko04812deepkoala

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