Detailed information of Pocillopora_acuta_HIv2___RNAseq.g18466.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000013:2160573...2176324
NR annotation: XP_027044072.1, intraflagellar transport protein 88 homolog [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61371Intraflagellar transport protein 88 homolog OS=Mus musculus OX=10090 GN=Ift88 PE=1 SV=2
Q13099Intraflagellar transport protein 88 homolog OS=Homo sapiens OX=9606 GN=IFT88 PE=1 SV=3
A0A644F649Intraflagellar transport protein 88 OS=Giardia intestinalis (strain ATCC 50803 / WB clone C6) OX=184922 GN=GL50803_0016660 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07719TPR_2Tetratricopeptide repeatRepeatInterproscan
PF13174TPR_6Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013105RepeatTetratricopeptide repeat 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44117INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0019894Molecular Functionkinesin bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0097546Cellular Componentciliary baseInterproscan
GO:0097730Cellular Componentnon-motile ciliumInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16474IFT88; intraflagellar transport protein 88-Cilium and associated proteinsko03037deepkoala

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